Conference OPTIMAL IMPERFECT PHYLOGENY RECONSTRUCTION AND HAPLOTYPING (IPPH) 2006 199-210 Sridhar S, Blelloch GE, Ravi R, Schwartz R
Journal Article Optimal imperfect phylogeny reconstruction and haplotyping (IPPH). 2006 • Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference • 199-210 Sridhar S, Blelloch GE, Ravi R, Schwartz R
Conference Rb dysfunctional breast cancers do not overexpress HER2, and their phenotype overlaps with that of basal-like breast cancers 2006 • Cancer Research • 66(8): Shackney SE, Emlet DR, Schwartz R, Pai S, Papasaikas P, Hu F, Janto B
Journal Article Relaxing haplotype block models for association testing 2006 • Proceedings of the Pacific Symposium on Biocomputing 2006, PSB 2006 • 454-466 Castellana N, Dhamdhere K, Sridhar S, Schwartz R
Conference Simple reconstruction of binary near-perfect phylogenetic trees 2006 • Lecture Notes in Computer Science • 3992:799-806 Sridhar S, Dhamdhere K, Blelloch GE, Halperin E, Ravi R, Schwartz R
Journal Article Simulation study of the contribution of oligomer/oligomer binding to capsid assembly kinetics 2006 • Biophysical Journal • 90(1):57-64 Zhang TQ, Schwartz R
Conference Implementation of a discrete event simulator for biological self-assembly systems 2005 • Proceedings of the ... Winter Simulation Conference. Winter Simulation Conference • 2223-2231 Zhang TQ, Rohlfs R, Schwartz R
Journal Article Local rule simulations of capsid assembly 2005 • Journal of Theoretical Medicine • 6(2):81-85 Schwartz R, Shor PW, Berger B
Journal Article Queue-based method for efficient simulation of biological self-assembly systems 2005 • Journal of Computational Physics • 204(1):100-120 Jamalyaria F, Rohlfs R, Schwartz R
Conference RELAXING HAPLOTYPE BLOCK MODELS FOR ASSOCIATION TESTING 2005 454-466 CASTELLANA N, DHAMDHERE K, SRIDHAR S, SCHWARTZ R
Conference Understanding molecular crowding effects on linear cytoskeleton assembly with reduced models 2005 • Biophysical Journal • 88(1):516A-516A Apeltsin L, Puskar K, LeDuc P, Schwartz R
Conference Algorithms for association study design using a generalized model haplotype conservation 2004 • Proceedings / IEEE Computational Systems Bioinformatics Conference, CSB. IEEE Computational Systems Bioinformatics Conference • 90-97 Schwartz R
Conference Algorithms for association study design using a generalized model of haplotype conservation 2004 • Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004 • 90-97 Schwartz R
Conference Bridging mechanical stimulation of cellular and molecular structure through lattice based computational simulations 2004 • Advances in Bioengineering, BED • 365-366 Puskar K, Apeltsin L, Ta'asan S, Schwartz R, Leduc PR
Journal Article Comparative immunopeptidomics of humans and their pathogens 2004 • Proceedings of the National Academy of Sciences of the United States of America • 101(36):13268-13272 Istrail S, Florea L, Halldórsson BV, Kohlbacher O, Schwartz RS, Yap VB, Yewdell JW, Hoffman SL
Journal Article Haplotype parsing: Methods for extracting information from human genetic variations 2004 • Applied bioinformatics • 3(2-3):181-191 Schwartz R
Conference Inferring piecewise ancestral history from haploid sequences 2004 • Lecture Notes in Computer Science • 2983:145 Schwartz R
Conference Inferring piecewise ancestral history from haploid sequences 2004 • Lecture Notes in Computer Science • 2983:62-73 Schwartz R, Clark AG, Istrail S
Conference Latticed based biological simulation of molecular assembly in cells 2004 • Molecular Biology of the Cell • 15:352A-352A Puskar K, Apeltsin L, Ta'asan S, Schwartz R, LeDuc P
Journal Article Optimal haplotype block-free selection of tagging SNPs for genome-wide association studies 2004 • Genome Research • 14(8):1633-1640 Halldórsson BV, Bafna V, Lippert R, Schwartz R, De La Vega FM, Clark AG, Istrail S
Journal Article Understanding actin organization in cell structure through lattice based Monte Carlo simulations. 2004 • Mechanics & chemistry of biosystems : MCB • 1(2):123-131 Puskar K, Apeltsin L, Ta'asan S, Schwartz R, LeDuc PR
Conference Understanding spatial constraints on biological self-assembly systems through lattice based Monte Carlo modeling 2004 • Biophysical Journal • 86(1):630A-630A Puskar K, Kong M, Ta'asan S, Schwartz R, LeDuc P
Conference Epitope prediction algorithms for peptide-based vaccine design 2003 • Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference • 17-26 Florea L, Halldórsson B, Kohlbacher O, Schwartz R, Hoffman S, Istrail S
Journal Article Epitope prediction algorithms for peptide-based vaccine design. 2003 • Proceedings / IEEE Computer Society Bioinformatics Conference. IEEE Computer Society Bioinformatics Conference • 2:17-26 Florea L, Halldórsson B, Kohlbacher O, Schwartz R, Hoffman S, Istrail S
Journal Article Haplotype motifs: An algorithmic approach to locating evolutionarily conserved patterns in haploid sequences 2003 • Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference • 306-314 Schwartz R
